Insertion junction: LMJ.RY0402.111792_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.111792
Chromosome:chromosome 5
Location:197430
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g234200 (1 of 1) IPR001374//IPR020683 - R3H domain // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACGCAACCACCACGGCTTGCAAGCAA
Internal bar code:AAATTCCGTGGCAAGCTAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:176
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGAAATGAGTGTTCCCG
Suggested primer 2:ACCTGCAACCGCTACTCTGT