Insertion junction: LMJ.RY0402.112429_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.112429
Chromosome:chromosome 5
Location:1986342
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g241643 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAGGCAGGTTCAGCTCGTTAGCCCCCC
Internal bar code:TAGGGAAGCCACGGTGCAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:196
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAACTGGGTGCAGATGGTTT
Suggested primer 2:CTTCAAGTCGCTCCCTAACG