Insertion junction: LMJ.RY0402.112508_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.112508
Chromosome:chromosome 10
Location:2443895
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g435800 CSP41b,CSP41B,SNE11,RAP38 Chloroplast stem-loop-binding protein 41b; (1 of 1) PTHR10366:SF289 - CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA B, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAGCTGCTAGTGCTGGGAGCGCTGCGCT
Internal bar code:TCTCGGTACCCGCCCTCAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:905
LEAP-Seq percent confirming:99.7162
LEAP-Seq n confirming:5622
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTTGCTATCCCACCCTT
Suggested primer 2:CAGCAGAGGCGTTGATGATA