Insertion junction: LMJ.RY0402.112700_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.112700
Chromosome:chromosome 6
Location:1142816
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g257050 GBS2 Granule bound starch synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAGTACACCCGACCCGCCCAACACATT
Internal bar code:GTAGCTAATATGAGTTAGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1089
LEAP-Seq percent confirming:99.5984
LEAP-Seq n confirming:1240
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTTAATGAGCCCAAGT
Suggested primer 2:CACGTTCATGTCACCACCTC