Insertion junction: LMJ.RY0402.112706_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.112706
Chromosome:chromosome 5
Location:2456036
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g235450 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCCTTTCAGTTCTGCCACCCCCGCGC
Internal bar code:CGAACAGACGCACTTTGGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:253
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:138
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AACATAAGTCAACCGCCAGG
Suggested primer 2:ATGTCTGTCAAGTACCGCCC