Insertion junction: LMJ.RY0402.112964_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.112964
Chromosome:chromosome 3
Location:4487966
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g176200 (1 of 1) PTHR22904//PTHR22904:SF364 - TPR REPEAT CONTAINING PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTAGCAAGCACTTCGCTAACCACCACCC
Internal bar code:CGCCGTTGAGTGGCAGCAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:889
LEAP-Seq percent confirming:96.4305
LEAP-Seq n confirming:1810
LEAP-Seq n nonconfirming:67
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACTCGTCTAGCGGTTGT
Suggested primer 2:CCAGAGGCTAGTTGCAGAGG