Insertion junction: LMJ.RY0402.112978_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.112978
Chromosome:chromosome 3
Location:8008600
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAGTGCTGGCAAGCGTGCTAGCTAGCA
Internal bar code:GAGGCCAGGGGATGTGGGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:615
LEAP-Seq percent confirming:99.7896
LEAP-Seq n confirming:2371
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGCTCTCGTCTGTGAA
Suggested primer 2:ATCAAGGCCAAGACCAACAC