Insertion junction: LMJ.RY0402.113056_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.113056
Chromosome:chromosome 2
Location:5269915
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g106450 LCA1 (1 of 1) PTHR11440//PTHR11440:SF4//PTHR23070//PTHR23070:SF14 - LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED // PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE // BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED; AAA ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTGAGGTTGGTGCTTGTCTGCTTGCAC
Internal bar code:TTGAAGGGGTTGATCGCAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:876
LEAP-Seq percent confirming:98.8142
LEAP-Seq n confirming:500
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCGTATTTAAGGCAGC
Suggested primer 2:GGCTGCAGGGTAATTGAAAA