Insertion junction: LMJ.RY0402.113116_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.113116
Chromosome:chromosome 1
Location:4717221
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g032550 CGL127 (1 of 1) K11267 - sister chromatid cohesion protein PDS5 (PDS5); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCCGCGGCTCCAGCTGCGCGGGGCGGG
Internal bar code:GGCCGCGCAAAACCTTTGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:695
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACGTTCTCTTGGTGCAA
Suggested primer 2:CTGCTTCTTTCGTCCACACA