Insertion junction: LMJ.RY0402.113186_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.113186
Chromosome:chromosome 9
Location:4394761
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g395362 (1 of 4) 1.13.11.75 - All-trans-8'-apo-beta-carotenal 15,15'-oxygenase / 8'-apo-beta-carotenal 15,15'-oxygenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGTGTTCACTACCGTGCATTCTTCGGG
Internal bar code:CCCCCGCTACGTAGCTGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:638
LEAP-Seq percent confirming:99.8205
LEAP-Seq n confirming:1668
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTATGTCAGCGGTGGAGT
Suggested primer 2:AGGTCCTGGTCAAGCTCAAA