Insertion junction: LMJ.RY0402.113229_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.113229
Chromosome:chromosome 9
Location:3651042
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGACCTGTGCATGCCGTATATAAGCGGC
Internal bar code:TGGCCGACACCGATCAGTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:927
LEAP-Seq percent confirming:98.4702
LEAP-Seq n confirming:1223
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATTTTTGCCTTCTACCA
Suggested primer 2:CATACGCATGTACAAACGCC