Insertion junction: LMJ.RY0402.113559_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.113559
Chromosome:chromosome 17
Location:3997045
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g728864 OPR105 (1 of 781) IPR000104 - Antifreeze protein, type I; OctotricoPeptide Repeat protein 105 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACCCGACTGGCCGACTTGAGGTCACTT
Internal bar code:ACGCCGCGTTTGGGACGCACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:442
LEAP-Seq percent confirming:99.0919
LEAP-Seq n confirming:1746
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTCGGATTATGTCTTGT
Suggested primer 2:AGGCTTCTGAAGAGCAGCAG