Insertion junction: LMJ.RY0402.113559_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.113559
Chromosome:chromosome 17
Location:3997047
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g728864 OPR105 (1 of 781) IPR000104 - Antifreeze protein, type I; OctotricoPeptide Repeat protein 105 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTCCTGCGCGCTCGTGCTTCGCCCCGCA
Internal bar code:GTGAGCGGCCGCAACGGTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:632
LEAP-Seq percent confirming:99.3151
LEAP-Seq n confirming:2175
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTCGGATTATGTCTTGT
Suggested primer 2:AGGCTTCTGAAGAGCAGCAG