Insertion junction: LMJ.RY0402.113921_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.113921
Chromosome:chromosome 11
Location:1106981
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467678 COP6,HKR2 (1 of 5) IPR001660//IPR013761 - Sterile alpha motif domain // Sterile alpha motif/pointed domain; Histidine cyclase rhodopsin 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCCCTCCTCCTGCTGCTCCCCCCGCT
Internal bar code:CCAAGATAAGCGATTAGAGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:515
LEAP-Seq percent confirming:98.6779
LEAP-Seq n confirming:1642
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCATTCGTACTCGCTGTC
Suggested primer 2:TGTAGCAGCAGGCTATGCAC