Insertion junction: LMJ.RY0402.114019_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.114019
Chromosome:chromosome 17
Location:5324008
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g736350 SCC3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTACCTGGCGGGCACGATGTTACACAGG
Internal bar code:AAATAACACACGCTATTGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:623
LEAP-Seq percent confirming:99.7081
LEAP-Seq n confirming:3757
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATTGGAATGGGATGTC
Suggested primer 2:GTTTGACCAGGTCGTGGACT