Insertion junction: LMJ.RY0402.114062_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.114062
Chromosome:chromosome 3
Location:1583411
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g152550 (1 of 1) IPR000104//IPR001680//IPR011041//IPR015943//IPR017986//IPR020472//IPR027417 - Antifreeze protein, type I // WD40 repeat // Soluble quinoprotein glucose/sorbosone dehydrogenase // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAACGAGGTAGTTGAGTGTGTGCGCGGCC
Internal bar code:GCGCCTTGGTGCACCCGCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:659
LEAP-Seq percent confirming:98.2718
LEAP-Seq n confirming:2104
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGACCAGGCATAGCTCAC
Suggested primer 2:GTCCTTCTGCTCCTCCTCCT