Insertion junction: LMJ.RY0402.114253_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.114253
Chromosome:chromosome 11
Location:2399519
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g474850 PUS17 (1 of 2) 5.4.99.29 - 23S rRNA pseudouridine(746) synthase / 23S RNA Psi(746) synthase; RNA pseudouridine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGGGGGCTCATGGCTGACAAGGCCACG
Internal bar code:TAGGCTTGAGAGGATTGCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:99.9213
LEAP-Seq n confirming:1270
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGCTGTGTTGCTGTTCG
Suggested primer 2:TTCAGATGGTTGGTGAACGA