Insertion junction: LMJ.RY0402.114412_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.114412
Chromosome:chromosome 17
Location:3133437
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g721500 GBSS1A,STA2,GBBSI,GBS1 (1 of 2) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein; Granule-bound starch synthase IA 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAGAGTAACGAAACTGTAGCAGTAGCA
Internal bar code:GCAGGTGACGCGGAGACGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:835
LEAP-Seq percent confirming:99.8653
LEAP-Seq n confirming:3706
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAGGAGATCAAGGTGCC
Suggested primer 2:AATCTCTCATCATCGACGGG