Insertion junction: LMJ.RY0402.114434_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.114434
Chromosome:chromosome 9
Location:5867821
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g402330 (1 of 1) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGTTGGATCCGGTCAGCCAGGTGGCCA
Internal bar code:ATCTGCCGGCCTCTCCGGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:99.8528
LEAP-Seq n confirming:2035
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCCCTCTAACATTTCCA
Suggested primer 2:CTTTGCTCTACGACCCTTCG