Insertion junction: LMJ.RY0402.114737_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.114737
Chromosome:chromosome 15
Location:681018
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre15.g639056 (1 of 5) IPR000104//IPR001214 - Antifreeze protein, type I // SET domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACATCCATTCCGAGTCCCATCCACCAC
Internal bar code:GATGACGACGCGGCGTGGATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:506
LEAP-Seq percent confirming:99.7253
LEAP-Seq n confirming:726
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGTGTTTGGGGGTTAC
Suggested primer 2:AGTTGAAACCGTAACCGTCG