Insertion junction: LMJ.RY0402.114763_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.114763
Chromosome:chromosome 17
Location:1584422
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g707650 SNRK2L (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTAAACGGTAACAAAACACGACGCGTTA
Internal bar code:GTTAACGTCCACGTTCTAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:439
LEAP-Seq percent confirming:99.7817
LEAP-Seq n confirming:2285
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGGCATTTCTGTAAATA
Suggested primer 2:ATCACGCTGGACCTGTCTTC