Insertion junction: LMJ.RY0402.114846_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.114846
Chromosome:chromosome 16
Location:6411461
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g673650 CP26,LHCB5 (1 of 1) K08916 - light-harvesting complex II chlorophyll a/b binding protein 5 (LHCB5); Light-harvesting minor chlorophyll a/b binding protein of photosystem II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCAATTCGATCAGGCCCGAAGAAGCT
Internal bar code:AGTTTTTGCTCCCGCGGGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1053
LEAP-Seq percent confirming:99.7937
LEAP-Seq n confirming:1935
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTTACAAAGCGACTCAA
Suggested primer 2:ATGGAGTACGGACGATGGAG