Insertion junction: LMJ.RY0402.114854_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.114854
Chromosome:chromosome 13
Location:2807990
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g583050 Tic55-like5,TIC55-5,PAO8 Pheophorbide a oxygenase-related protein; (1 of 3) K13071 - pheophorbide a oxygenase (PAO, ACD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGCTCCCCCTCCACGCCCTCCCTCGAT
Internal bar code:TTCGCGGTCGCGCAGATTCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:583
LEAP-Seq percent confirming:91.2338
LEAP-Seq n confirming:281
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGACATGGTACGGTGCT
Suggested primer 2:CCTGTGTGTTATGAATGCGG