Insertion junction: LMJ.RY0402.115016_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.115016
Chromosome:chromosome 4
Location:1610220
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g213150 MAE13 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATTAGGTGCTTTCCTTCGGTGCCGGAG
Internal bar code:TTTCACTACGTGACACTCTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1040
LEAP-Seq percent confirming:99.3653
LEAP-Seq n confirming:4540
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTCATCCCGGTAGCAAG
Suggested primer 2:CGGAGTAGCAGCATCCTTTC