Insertion junction: LMJ.RY0402.115174_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.115174
Chromosome:chromosome 9
Location:1245301
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGACAAGACCCCGTCTCCCGCAGCCAAA
Internal bar code:ACCGCGCTGCTCCGCAATGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:469
LEAP-Seq percent confirming:96.8987
LEAP-Seq n confirming:4343
LEAP-Seq n nonconfirming:139
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTCCTTCACTTGACTTC
Suggested primer 2:AATGGGAAGTGCATAAACGC