Insertion junction: LMJ.RY0402.115282_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.115282
Chromosome:chromosome 6
Location:8322269
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g306150 (1 of 1) IPR000104//IPR004919 - Antifreeze protein, type I // Domain of unknown function DUF262 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCGGCCTTGCCATGCATGGCTGGGCG
Internal bar code:CTGTCTCCGCCGCCGTGCAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:272
LEAP-Seq percent confirming:99.8599
LEAP-Seq n confirming:1426
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCACCGGGTGTTCACATA
Suggested primer 2:GCTTTGCATACGTCCCATTT