Insertion junction: LMJ.RY0402.115535_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.115535
Chromosome:chromosome 6
Location:4930793
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g279500 CPL6 Conserved in the Plant Lineage; (1 of 1) PTHR15852:SF8 - CHAPERONE PROTEIN DNAJ-LIKE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTGGAGCCGACGCACAGCGTCCCACGA
Internal bar code:GGTTTTGGGTGGAGAGTATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:762
LEAP-Seq percent confirming:95.6121
LEAP-Seq n confirming:1765
LEAP-Seq n nonconfirming:81
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGAAGGAGGAAGGGAAG
Suggested primer 2:GGAAGCTAGGACACGACTGG