Insertion junction: LMJ.RY0402.115639_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.115639
Chromosome:chromosome 6
Location:7197062
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g297850 DHC12,DHC1a,PCR4 (1 of 1) PF03028//PF07728//PF08393//PF12774//PF12775//PF12777//PF12780//PF12781 - Dynein heavy chain and region D6 of dynein motor (Dynein_heavy) // AAA domain (dynein-related subfamily) (AAA_5) // Dynein heavy chain, N-terminal region 2 (DHC_N2) // Hydrolytic ATP binding site of dynein motor region D1 (AAA_6) // P-loop containing dynein motor region D3 (AAA_7) // Microtubule-binding stalk of dynein motor (MT) // P-loop containing dynein motor region D4 (AAA_8) // ATP-binding dynein motor region D5 (AAA_9); inner arm dynein heavy chain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCGGTTGCTAGAGAGGAAAGGAAACAC
Internal bar code:GACCGACGACCGGTAGACTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:770
LEAP-Seq percent confirming:83.3024
LEAP-Seq n confirming:1796
LEAP-Seq n nonconfirming:360
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATATGATGTCGAAGGGGCTG
Suggested primer 2:AATGGTTGTCCTTCTGTGCC