Insertion junction: LMJ.RY0402.115666_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.115666
Chromosome:chromosome 16
Location:1107287
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g649800 PPR3,CYCR6 (1 of 1) PF02984//PF13041 - Cyclin, C-terminal domain (Cyclin_C) // PPR repeat family (PPR_2); PentatricoPeptide Repeat protein 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCCATCAGCAGCCTGCAGTCGCAAGTC
Internal bar code:ATGATTCCCGGGCGCGAGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:210
LEAP-Seq percent confirming:99.7825
LEAP-Seq n confirming:2294
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGTAACTTACCCACGCC
Suggested primer 2:CTCATGGTGTGTTGTGGGTC