Insertion junction: LMJ.RY0402.115684_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.115684
Chromosome:chromosome 13
Location:1412351
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g572050 SMG1 (1 of 1) K08873 - PI-3-kinase-related kinase SMG-1 (SMG1); Nonsense-mediated decay (NMD) pathway protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCGGCGCCTGTAGCTGCGGCAGCCGCAG
Internal bar code:GGTAAGCACCAAATCGTAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:324
LEAP-Seq percent confirming:98.4848
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGACTCTCCTGCTCCATC
Suggested primer 2:TTTGGTTTAGTTTGGGCTGG