Insertion junction: LMJ.RY0402.115827_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.115827
Chromosome:chromosome 11
Location:2524692
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g475950 HLM16 putative N-methyltransferase; (1 of 5) IPR001214//IPR003616 - SET domain // Post-SET domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAACGCATGATGTGCGCAGTGTAATTG
Internal bar code:AGGGAGAGGGTGACCCGGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:17
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCGTACGGTAGCTGATG
Suggested primer 2:ACCAGCAACCAACCTGAATC