Insertion junction: LMJ.RY0402.115879_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.115879
Chromosome:chromosome 2
Location:513633
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g076987 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGCAAGGGAGCGCGGCGCAGGTTTCAT
Internal bar code:GGGGGCACTGGGTAACACGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:575
LEAP-Seq percent confirming:95.6269
LEAP-Seq n confirming:4614
LEAP-Seq n nonconfirming:211
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCTCCTCACGTAGGTCT
Suggested primer 2:ATTCTGGTGGATTCTGGTGC