Insertion junction: LMJ.RY0402.115909_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.115909
Chromosome:chromosome 9
Location:2347447
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g392105 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCAAAACAGCAGGCACACTATGCTTAG
Internal bar code:CACATTCGGGACAGGGTTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:994
LEAP-Seq percent confirming:98.9718
LEAP-Seq n confirming:2214
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACCATGTTGAGTCGGAA
Suggested primer 2:CAGTCGTCCACCCACTTCTT