Insertion junction: LMJ.RY0402.115909_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.115909
Chromosome:chromosome 9
Location:2347587
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g392105 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTTCTCATCCTGCAGGAACAAACGCG
Internal bar code:GATAGTCGACTCCGGGATTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:649
LEAP-Seq percent confirming:85.5093
LEAP-Seq n confirming:2980
LEAP-Seq n nonconfirming:505
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACCATGTTGAGTCGGAA
Suggested primer 2:CAGTCGTCCACCCACTTCTT