Insertion junction: LMJ.RY0402.115934_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.115934
Chromosome:chromosome 14
Location:3359044
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g630150 (1 of 1) PTHR10131//PTHR10131:SF52 - TNF RECEPTOR ASSOCIATED FACTOR // TNF RECEPTOR-ASSOCIATED FACTOR FAMILY PROTEIN DDB_G0268444-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTGGTCCCACTCCCAGGCTTCTTGAC
Internal bar code:CCGCCGATTGTCCAGAGGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:99.8684
LEAP-Seq n confirming:28079
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTGTATCCCTTGGCTT
Suggested primer 2:GCGTGTGTGTGTGTGTGTGT