Insertion junction: LMJ.RY0402.116197_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.116197
Chromosome:chromosome 5
Location:2648448
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g236500 (1 of 1) 3.5.1.23 - Ceramidase / Acylsphingosine deacylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCGACCCTTGGCCTCTCCACACACACC
Internal bar code:TATCCGTTCTGTCCGTGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:457
LEAP-Seq percent confirming:78.7299
LEAP-Seq n confirming:5641
LEAP-Seq n nonconfirming:1524
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCTCTACCTTCCCCTG
Suggested primer 2:CTTGTGCTCTCTCACCTCCC