Insertion junction: LMJ.RY0402.116211_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.116211
Chromosome:chromosome_8
Location:2385445
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre08.g371000 antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):ACCCAATGCCACCACCAGGCACCGCTGTAC
Internal bar code:GAGCAGGCTGAAGGGGCCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:241
LEAP-Seq percent confirming:16.0594
LEAP-Seq n confirming:974
LEAP-Seq n nonconfirming:5091
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGTTGTGCATTCGTGAT
Suggested primer 2:AATGCAACCCCTGCTACAAC