Insertion junction: LMJ.RY0402.116225_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.116225
Chromosome:chromosome 6
Location:8848870
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g310601 TNP19 putative transposase; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATCCCTGAACCCTGAAGAAAATCCTGA
Internal bar code:GCGAAGGAAGAGGCGAGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:635
LEAP-Seq percent confirming:96.8017
LEAP-Seq n confirming:454
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCAGGGACACGAGACATT
Suggested primer 2:AATCGTGGAGGACGAGTACG