Insertion junction: LMJ.RY0402.116388_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.116388
Chromosome:chromosome 9
Location:5715475
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401626 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCAATTGCATTCGACACGCCCGCCACT
Internal bar code:TCGTCGGTTTCACATCCCAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:863
LEAP-Seq percent confirming:76.3342
LEAP-Seq n confirming:5793
LEAP-Seq n nonconfirming:1796
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACCCTACGGGACTTTAC
Suggested primer 2:CGAAGAGGCAGCCATTACTC