Insertion junction: LMJ.RY0402.116782_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.116782
Chromosome:chromosome 9
Location:2866665
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g388500 (1 of 13) PF09273 - Rubisco LSMT substrate-binding (Rubis-subs-bind) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGAGCTAGTTGAGAACCGTTAAGGGAG
Internal bar code:CATGGAGCAGGGGTTTCAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:970
LEAP-Seq percent confirming:99.3274
LEAP-Seq n confirming:4873
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGCAGGTGTTCTCCTC
Suggested primer 2:GGTTGCCATGTACAGTCGTG