Insertion junction: LMJ.RY0402.116785_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.116785
Chromosome:chromosome 4
Location:3947064
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g231222 CPN60A,CPN60 alpha Chaperonin 60A; (1 of 1) PTHR11353:SF11 - CHAPERONIN 60 SUBUNIT ALPHA 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATACAGCCTGCCTACATTCCCGCGGCC
Internal bar code:GTGGCTCAACGGGTGTGGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:764
LEAP-Seq percent confirming:97.7492
LEAP-Seq n confirming:912
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTGTCAAGTGTGAGAGG
Suggested primer 2:TTAGCTCGCAACGATTTGTG