Insertion junction: LMJ.RY0402.116792_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.116792
Chromosome:chromosome 11
Location:1781911
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467400 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGCGGTGCATACGCTACCGTATCGTA
Internal bar code:CTGGAGAGCATATTTAACGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:890
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:333
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCGAGGATAAGGATAAGG
Suggested primer 2:TTTTGTGAGCAATTTGCAGC