Insertion junction: LMJ.RY0402.117224_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.117224
Chromosome:chromosome 17
Location:2593625
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g716900 (1 of 1) IPR002104//IPR010998//IPR011010 - Integrase, catalytic domain // Integrase, Lambda-type, N-terminal // DNA breaking-rejoining enzyme, catalytic core 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATATGTAACAACTCGAGGAACAAGAAA
Internal bar code:GTTTACCGGGTGGCGGAGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:62
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:149
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCTCTTACGAACGCAAC
Suggested primer 2:TCTGGTTCAGTGGTCATGGA