Insertion junction: LMJ.RY0402.117298_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.117298
Chromosome:chromosome 13
Location:1127509
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g569500 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGGCTGATGTCCACCTGCCCACGCTA
Internal bar code:GCGGAACCTGCTGCGCGGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:558
LEAP-Seq percent confirming:99.6187
LEAP-Seq n confirming:1045
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAAACCCAAGTACCAAAT
Suggested primer 2:GTCGCTGTAGTTGACGGACA