Insertion junction: LMJ.RY0402.117480_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.117480
Chromosome:chromosome 10
Location:3038773
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g441300 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGAGCGCAGGGCTGGGGCACAAGCAA
Internal bar code:CAAGGGATATCCCCTACGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:821
LEAP-Seq percent confirming:73.4633
LEAP-Seq n confirming:980
LEAP-Seq n nonconfirming:354
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGGACTTCCGGATACTG
Suggested primer 2:TCTACTGCGTGCGGTGTAAG