Insertion junction: LMJ.RY0402.117595_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.117595
Chromosome:chromosome 5
Location:2864834
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g237910 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTCTCTGCGTGAAGCTGGGGTAATGT
Internal bar code:GCCTAACCATGGTTTGTGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:717
LEAP-Seq percent confirming:98.6952
LEAP-Seq n confirming:1059
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGTGTGTGGGCAGGATG
Suggested primer 2:GCTTGTCGGTTTTGAAGCTC