Insertion junction: LMJ.RY0402.118636_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.118636
Chromosome:chromosome 1
Location:4627498
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g031800 (1 of 1) PTHR23083//PTHR23083:SF433 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCCTGACTCAGCCAGCATAACCCACTG
Internal bar code:CTCGCGTGGTGCGCAAATGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:786
LEAP-Seq percent confirming:99.6283
LEAP-Seq n confirming:15544
LEAP-Seq n nonconfirming:58
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGTGTGTGTGAGAGAG
Suggested primer 2:ATTGTTCATTGCTCTCGGCT