Insertion junction: LMJ.RY0402.118828_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.118828
Chromosome:chromosome 3
Location:2718855
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g161550 FAP55 (1 of 1) IPR009053//IPR023220 - Prefoldin // Type IV secretion system, VirB5-domain; Flagellar Associated Protein 55 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCTCATAGTCAAACCACAGGCCGACAT
Internal bar code:CAGAGAGTGGGTTCATCAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:855
LEAP-Seq percent confirming:96.3896
LEAP-Seq n confirming:6007
LEAP-Seq n nonconfirming:225
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGGTGAAGTGCTACCCT
Suggested primer 2:CACTACTGAGCGACTGAGCG