Insertion junction: LMJ.RY0402.118852_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.118852
Chromosome:chromosome 4
Location:1359726
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g214501 PNP1,PNT2 Chloroplast polyribonucleotide phosphorylase; (1 of 1) 2.7.7.8 - Polyribonucleotide nucleotidyltransferase / Polynucleotide phosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCACCCCACTCCTCTCCAACCCACCCC
Internal bar code:TCTTAATGCTTTAATATTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:318
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTTTCCCTAACCGTAAC
Suggested primer 2:CTCGCTGAGTAAGGAGGTGC