Insertion junction: LMJ.RY0402.118852_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.118852
Chromosome:chromosome 4
Location:1359730
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g214501 PNP1,PNT2 Chloroplast polyribonucleotide phosphorylase; (1 of 1) 2.7.7.8 - Polyribonucleotide nucleotidyltransferase / Polynucleotide phosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGTGGGGTGGAGAAACGATCCCGGCAG
Internal bar code:TGTGCCGTCTCTGCTGCACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:302
LEAP-Seq percent confirming:97.5424
LEAP-Seq n confirming:1151
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTTTCCCTAACCGTAAC
Suggested primer 2:CCTCGCTGAGTAAGGAGGTG